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Citations for Illumina :
1 - 50 of 9665 citations for Human Mitochondrial Genome Maintenance Exonuclease 1 MGME1 ELISA Kit since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2020Quote: Mitochondrial genomes (mitogenomes) were reconstructed from Illumina reads with MITObim version 1.6 [54] ...
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bioRxiv - Microbiology 2024Quote: ... The mitochondrial genome was assembled from Illumina reads using GetOrganelle (v1.7.5.3 ...
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bioRxiv - Microbiology 2022Quote: ... A circular mitochondrial genome was assembled from Illumina reads using GetOrganelle (v1.7.5.3 ...
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bioRxiv - Evolutionary Biology 2020Quote: ... Sixteen aphid whole and partial mitochondrial genomes were assembled from Illumina Hiseq 4000 paired reads obtained from the Sequence Read Archive (SRA ...
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bioRxiv - Genomics 2023Quote: Chloroplastic and mitochondrial genomes of each species were reconstructed from Illumina raw reads using NovoPlasty (Dierckxsens et al ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Mitochondrial genomes for all individuals in the sister-species dataset were extracted directly from Illumina reads with GetOrganelle v1.7.5.3 (Jin et al ...
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bioRxiv - Molecular Biology 2023Quote: ... Genome-wide DNA methylation was analysed on 850000 CpGs with the Infinium Human MethylationEPIC Kit (Illumina) according to the manufacturer’s instructions.
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bioRxiv - Genomics 2023Quote: ... We completed the mitochondrial genome by inspecting the mapping results and editing the gap regions usually spanned by Illumina- and/or ONT-reads.
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bioRxiv - Cancer Biology 2020Quote: ... Probe locations on the human genome (hg19 version) defined by Illumina was used for the analysis ...
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bioRxiv - Evolutionary Biology 2023Quote: ... (2022) sequenced 2,504 human genomes to 30x coverage (Illumina NovaSeq 6000). They mapped these data to the human genome assembly GRCh38 and called genotypes using GATK HaplotypeCaller ...
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bioRxiv - Molecular Biology 2019Quote: ... Trimmed reads were mapped to the human genome (hg38 downloaded from Illumina iGenomes on August 8th ...
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bioRxiv - Molecular Biology 2020Quote: ... using Illumina whole-genome expression array Human HT-12 V4 (Illumina, Saffron Walden, U.K.). Normalization of the quantified signals (background corrected ...
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bioRxiv - Cancer Biology 2021Quote: ... Each library was sequenced to 2x human genome coverage on Novaseq sequencer (Illumina, CA).
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bioRxiv - Cancer Biology 2022Quote: ... The reference genome sequences for human (hg38) and mouse (mm10) were downloaded from Illumina iGenomes (www.support.illumina.com/sequencing/sequencing_software/igenome.html) ...
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bioRxiv - Molecular Biology 2023Quote: ... Genome-wide DNA methylation patterns were evaluated by Infinium Human Methylation 850 K BeadChips (Illumina), which determine the methylation levels of 853,307 CpG sites ...
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bioRxiv - Biophysics 2023Quote: ... we aligned the trimmed reads to the human reference genome (hg19, downloaded from Illumina’s iGenomes) using Hisat2 94 with “-k 1 –no-spliced-alignment –phred33” parameters and stored them as binary alignment maps (BAM) ...
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bioRxiv - Molecular Biology 2023Quote: ... The RNA sequencing was performed at BCM Human Genome Sequencing Center using NovaSeq 6000 platform (Illumina). The raw fastq files were first quality checked using FastQC v0.11.8 software (http://www.bioinformatics.bbsrc.ac.uk/projects/fastqc/) ...
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bioRxiv - Evolutionary Biology 2020Quote: ... prepared whole genome libraries using a Nextera DNA Sample Preparation Kit (Illumina) and obtained high-coverage paired-end sequences from MedGenome ...
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bioRxiv - Genomics 2022Quote: ... genome amplification by standard Arctic primers mainly using COVID-Seq kits (Illumina) or Qiaseq (Qiagen ...
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bioRxiv - Molecular Biology 2022Quote: ... Whole genomes shotgun libraries were prepared using the Nextera XT Kit (Illumina). Samples were sequenced on the NextSeq 2000 with approximately 10–30 million reads per sample ...
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bioRxiv - Cell Biology 2022Quote: ... Sulzberger Columbia Genome Center using TruSeq Stranded mRNA Library Prep Kit (Illumina) for library preparation followed by sequencing using NovaSeq (2×100 bp) ...
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bioRxiv - Cancer Biology 2021Quote: ... RNAseq-based gene expression and methylation array data (either Illumina human methylation27K array, n = 15 genomes; or Illumina human methylation450K array ...
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bioRxiv - Microbiology 2022Quote: ... Raw sequencing reads were aligned to the hg19 human genome with the Basespace RNA-Seq Aligment application (Illumina). GO-term enrichment was performed using Biojupies (44) ...
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bioRxiv - Cell Biology 2022Quote: We identified genes with significantly differential transcript levels following the RSEM-EBSeq workflow outlined at http://deweylab.github.io/RSEM and used the sequences and annotation of UCSC human genome v19 (hg19) from Illumina igenome ...
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bioRxiv - Neuroscience 2022Quote: ... Pair-end reads of cDNA sequences were aligned back to the human genome (UCSC hg19 from Illumina iGenome) by the spliced read mapper TopHat (v2.0.4 ...
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bioRxiv - Systems Biology 2022Quote: ... the alignment of RNA-seq reads against the human reference genome (NCBI build37.2, downloaded from iGenome of Illumina) was performed using TopHat2 (version 2.0.13 ...
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bioRxiv - Cell Biology 2020Quote: ... Genome Analyzer II (Illumina) was used to perform 2×36 cycles of paired-end sequencing ...
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bioRxiv - Genomics 2020Quote: Genome Studio (Illumina, Inc.) was used to cluster and normalize raw genotyping data ...
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bioRxiv - Genomics 2021Quote: ... AGENOME-ZPMS-HV2a-1 was generated by realigning the mapped mitochondrial reads from Illumina as well as Nanopore data with the initial assembly.
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bioRxiv - Genomics 2023Quote: ... The genome of TY-11 was sequenced using a whole-genome (WGS) strategy (30-fold genome coverage) with NextSeq 550 (Illumina, USA).
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bioRxiv - Microbiology 2020Quote: ... whole-genome sequencing was carried out using the Illumina HiSeq2500 genome analyser (Illumina HiSeq 2500 platform ...
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bioRxiv - Genomics 2019Quote: ... two different strategies were implemented in order to help in genome scaffolding: 1) Nextera Mate-Pair Preparation Kit (Illumina Inc) was used to make two mate pairs (MP ...
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bioRxiv - Microbiology 2023Quote: ... Libraries for next-generation sequencing were constructed from 1-ng amplified genomes using the Nextera XT DNA Library Preparation Kit (Illumina) and sequenced using the MiSeq Reagent Kit v3 on the MiSeq Platform (Illumina) ...
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bioRxiv - Genomics 2020Quote: Whole Genome libraries were prepared using the TruSeq DNA Sample Preparation Kit (Illumina) by following the manufacturer’s low throughput protocol ...
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bioRxiv - Genomics 2020Quote: ... we performed whole-genome sequencing of PX506 strain using the Nextera kit (Illumina) for 100bp paired-end read sequencing on the Illumina Hi-Seq 4000 platform (University of Oregon Sequencing Facility ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries for whole genome sequencing were constructed using the Nextera XT kit (Illumina) with unique i7 indices for each patient sample according to the manufacturer’s instructions.
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bioRxiv - Neuroscience 2019Quote: ... Genome integrity for iPSC lines and their corresponding fibroblasts was assessed using the Human OmniExpress24 array (∼700,000 markers, Illumina) and analysed using KaryoStudio software (Illumina).
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bioRxiv - Microbiology 2020Quote: Raw reads were aligned to the human genome (hg19) using the RNA-Seq Aligment App on Basespace (Illumina, CA), following differential expression analysis using DESeq213 ...
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bioRxiv - Cell Biology 2020Quote: ... Trimmed reads were mapped to the National Cener for Biotechnology Information (NCBI) human reference genome (GRCh38) downloaded from Illumina iGenomes (http://igenomes.illumina.com.s3-website-us-east-1.amazonaws.com/Homo_sapiens/NCBI/GRCh38/Homo_sapiens_NCBI_GRCh38.ta r.gz ...
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bioRxiv - Microbiology 2020Quote: ... Raw reads were aligned to the human genome (hg19) using the RNA-Seq Aligment App on Basespace (Illumina, CA), following differential expression analysis using DESeq227 ...
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bioRxiv - Genomics 2021Quote: ... Raw sequencing reads on FASTQ files were submitted to base quality control and mapped to human reference genome GRCh37/hg19 utilizing the MiSeq Reporter software (MSR, v2.6, Illumina). Variant calling was executed using two algorithms ...
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bioRxiv - Neuroscience 2021Quote: ... Genome integrity and cell identity tracking was assessed using the Human CytoSNP-12v2.1 beadchip array or OmniExpress24 array (Illumina) on genomic DNA generated using the All-Prep kit (Qiagen ...
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bioRxiv - Microbiology 2020Quote: Raw reads were aligned to the human genome (hg19) using the RNA-Seq Alignment App on Basespace (Illumina, CA). The top 2000 gene counts with the highest variance were log transformed and Z-score normalized ...
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bioRxiv - Molecular Biology 2023Quote: ... lower coverage whole genome sequencing (“genome skimming”) using the next-generation sequencing by Illumina NovoSeq-5500 platform was used to obtain the missing genes ...
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bioRxiv - Cancer Biology 2021Quote: ... PhIX genome control library (Illumina) is included at 20-25% in each sequencing lane to improve cluster identification and base-balancing during sequencing ...
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bioRxiv - Developmental Biology 2021Quote: ... Whole genome sequencing (Illumina HiSeq)-based identification of deleterious mutations within the critical mapping region revealed a p.G17R mutation in rhoaa ...
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bioRxiv - Genomics 2024Quote: ... Genomes were assembled from Illumina reads using Unicycler (v0.4.8 ...
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bioRxiv - Cell Biology 2023Quote: ... Whole genome sequencing (SISPA-Illumina) was performed on final virus assay banks ...
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bioRxiv - Cancer Biology 2023Quote: ... workflow was used to estimate a matrix of sample gene expression values (92–94) using the reference human genome (GRCh37; Ensembl release 75) obtained from Illumina’s iGenomes resource (https://support.illumina.com/sequencing/sequencing_software/igenome.html) ...
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bioRxiv - Genomics 2019Quote: ... The genome libraries were constructed using the Nextera XT DNA sample prep kit (Illumina). Genomic sequence contigs were de novo assembled using default settings within CLC Genomics Workbench v9.5.2 (QIAGEN ...