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Citations for Illumina :
1 - 40 of 40 citations for Hantaan Virus Nucleoprotein E. coli since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Evolutionary Biology 2020Quote: ... raw sequence data were filtered for contaminants (E. coli, PhiX, Illumina adaptors or primers) and low quality reads using bowtie2_db (Langmead & Salzberg ...
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bioRxiv - Plant Biology 2024Quote: ... and second strand synthesis buffer (containing dNTPs, RNase H and E. coli polymerase I, Illumina) was added so that the second strand was produced by nick-translation ...
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bioRxiv - Molecular Biology 2024Quote: ... coli (Illumina) was added (10U/sample ...
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bioRxiv - Immunology 2022Quote: ... The virus sequence was confirmed by Illumina sequencing and did not differ from the parental virus ...
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bioRxiv - Genetics 2021Quote: ... coli strain (Illumina technologies). The library titled 7.600 cfu/mL with an average size of inserts of 35 Kb ...
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bioRxiv - Microbiology 2023Quote: ... and Respiratory Virus Oligo Panel v2 (Illumina #20044311). Tagmented cDNAs were amplified to add indexes and adapters ...
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bioRxiv - Immunology 2021Quote: ... The identity of the virus was confirmed by Illumina sequencing (see supplementary table 1).
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bioRxiv - Genomics 2020Quote: ... and E-Risk Study and from Illumina EPIC 850k Arrays in the Understanding Society study and the CALERIE Trial ...
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bioRxiv - Microbiology 2021Quote: ... coli isolates were determined by Illumina sequencers (25) ...
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bioRxiv - Pathology 2024Quote: ... insecticola (E, F) based on SNPs identified from Illumina sequencing ...
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bioRxiv - Genomics 2020Quote: ... Nextera Flex Enrichment Kit with Respiratory Virus Oligo Panel (Illumina Inc, USA) for viral RNA capture and sequencing ...
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bioRxiv - Genomics 2020Quote: ... with the respiratory virus oligo panel including SARS-CoV-2 probes (Illumina, San Diego ...
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bioRxiv - Neuroscience 2022Quote: ... according to the manufacturer’s instructions (Illumina, Part #15031047 Rev. E).
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bioRxiv - Microbiology 2019Quote: ... Libraries from different virus isolates were pooled and sequenced on iSeq 100 (Illumina) with 2×75bp reads.
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bioRxiv - Genomics 2020Quote: ... samples were enrichment with the Respiratory Virus Oligos Panel (Illumina, Catalog no. 20042472), which features ∼7800 probes designed to detect respiratory viruses ...
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bioRxiv - Microbiology 2022Quote: ... coli genome and fragmented using the Nextera transposase (Illumina). The resulting gene fragments were amplified by PCR to add sequence adapters for Gibson assembly (as well as stop codons in all three frames) ...
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bioRxiv - Microbiology 2019Quote: ... coli) was performed on the MiSeq instrument (Illumina, USA). The produced raw data were analyzed using SPAdes version 3.7123 ...
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bioRxiv - Immunology 2021Quote: Virus stocks were sequenced using a MiniSeq platform (Illumina, Inc; San Diego, CA, USA). In brief ...
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bioRxiv - Genomics 2020Quote: ... coli the final MPRA plasmid library was sequenced by Illumina 1 × 31 bp chemistry to acquire a baseline representation of each oligo-barcode pair within the library ...
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bioRxiv - Genomics 2022Quote: ... coli libraries met the Illumina (Illumina, San Diego, CA, USA) platform requirements ...
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bioRxiv - Microbiology 2020Quote: ... The virus was passaged three times in VeroE6 cells and genotype sequence confirmed by Illumina sequencing ...
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bioRxiv - Microbiology 2019Quote: ... coli isolates were prepared using the Nextera XT kit (Illumina, USA) according to the manufacturer’s protocol ...
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bioRxiv - Molecular Biology 2023Quote: ... The stability of the virus genotype after passage was confirmed via Sanger sequencing and by Illumina sequencing ...
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bioRxiv - Molecular Biology 2023Quote: ... coli transposition assays were mixed with 5 µL of tagmentation DNA buffer (Illumina) and 1 µL of amplicon tagmentation mix (Illumina ...
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bioRxiv - Molecular Biology 2021Quote: ... coli control sample was rRNA depleted using the RiboZero for bacteria kit (Illumina, USA). 100 ng of two replicates each of AbmR co-purified RNA and rRNA-depleted induced E.coli control RNA were converted into RNA-seq libraries using the NEBNext Ultra II Directional RNA Library Prep Kit for Illumina (New England Biolabs ...
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bioRxiv - Genomics 2021Quote: ... using the Illumina TruSeq mRNA library preparation protocol (poly-A selected) (Illumina; Part: 15031047 Revision E). mRNA-Seq libraries were sequenced on an Illumina NovaSeq 6000 platform to generate >66 M paired end reads per sample (Min ...
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bioRxiv - Microbiology 2020Quote: ... At Gdansk two independent protocols were used for SARS-CoV-2 genome sequencing: Illumina RNA prep with enrichment for respiratory virus oligos panel V2 followed by Illumina MiniSeq medium output run that produced 150-nucleotide paired-end reads ...
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bioRxiv - Immunology 2022Quote: Identity of virus stocks were confirmed by next-generation sequencing using a MiniSeq platform (Illumina, Inc; San Diego, CA, USA). RNA was purified from Trizol-inactivated material using a Direct-zol RNA Miniprep kit (Zymo Research ...
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bioRxiv - Pathology 2020Quote: Library preparation for NHBE samples infected with influenza A virus (IAV) was performed using the TruSeq Stranded mRNA Library Prep Kit (Illumina) with Poly-A enrichment ...
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bioRxiv - Microbiology 2022Quote: ... Passage 1 virus stocks were further produced in Vero TMPRSS2 cells and the presence of mutations was confirmed by Illumina sequencing ...
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bioRxiv - Plant Biology 2024Quote: ... Libraries were generated for three separate plants for each virus Libraries were sequenced (single-end, 75 nt) using an NextSeq 500 platform (Illumina).
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bioRxiv - Genomics 2021Quote: ... DNA fragments of the SARS CoV-2 genome were hybridized with biotinylated respiratory virus oligos (Illumina Inc., San Diego, CA, USA). The DNA fragments hybridized with the custom oligos were captured using streptavidin magnetic beads ...
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bioRxiv - Microbiology 2023Quote: The whole genome sequence of the mink-derived H5N1 clade 2.3.4.4b virus was determined using the Illumina MiSeq sequencing platform (Illumina, San Diego, CA, USA). Briefly ...
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bioRxiv - Microbiology 2023Quote: ... coli isolate was pooled together and sequenced on an Illumina MiSeq platform (Illumina, San Diego, CA) using 2 x 250 or 2 x 300 paired-end approach ...
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bioRxiv - Cancer Biology 2020Quote: All newly generated sequencing data have been deposited in the European Genome-phenome Archive (www.ebi.ac.uk/ega) with accession number EGAS00001004496 (sequencing) or ArrayExpress (www.ebi.ac.uk/arrayexpress/) with accession numbers E-MTAB-9297 (Illumina EPIC methylation arrays) and MTAB-9298 (Illumina 450k methylation arrays) ...
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bioRxiv - Genomics 2019Quote: ... The sequencing library with the mean insert size of 429bp (agarose gel, fraction E) was sequenced using TruSeq Rapid SBS Kit v2 (Illumina), in paired end mode ...
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bioRxiv - Microbiology 2024Quote: ... Raw genomic reads obtained by Illumina HiSeq 2500 and NovaSeq 6000 (for D. grisea, E. coxiae, Galdieria sp. ACUF 613, M. erythrocladioides, P. aerugineum, and T. oligopyrenoides) and by Illumina HiSeq 2500 and NovaSeq 6000 plus Oxford Nanopore MinION Mk 1B (for R ...
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bioRxiv - Genomics 2020Quote: Total RNA was extracted from Epstein–Barr-virus-transformed lymphoblastoid cell lines (LCLs) by following the Illumina TruSeq v2 RNA Sample Preparation protocol (Illumina, Inc., San Diego, CA) by the Department of Genetic Medicine and Development at the University of Geneva ...
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bioRxiv - Plant Biology 2023Quote: ... RNA libraries were prepared from samples that met the Illumina TruSeq® Stranded Total RNA Sample Preparation Guide (15031048 E) input guidelines using the Illumina TruSeq® Stranded Total (Plant) RNA Sample Preparation kit (Illumina Inc., San Diego, California, USA). For each library preparation ...
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bioRxiv - Microbiology 2020Quote: ... Samples that met the Illumina sample input guidelines were prepared according the TruSeq® Stranded mRNA Sample Preparation Guide (Rev. E) using the Illumina® TruSeq® Stranded mRNA Sample Preparation kit (Illumina Inc., San Diego, California, USA). For each library preparation ...