Labshake search
Citations for Illumina :
1 - 25 of 25 citations for Elabela 19 32 TFA since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Microbiology 2022Quote: ... aureus D4-19 was determined by Illumina short-read sequencing as described above ...
-
bioRxiv - Genomics 2021Quote: ... 19) and filtered for whole genome fastq data from Illumina instruments with a human sample background ...
-
bioRxiv - Genomics 2021Quote: ... For details of the 19 whole genome resequencing libraries (Illumina PE, mean ≈24x coverage) used for the demographic analysis ...
-
bioRxiv - Immunology 2022Quote: ... Paired-end sequencing (R1 19 bp; R2 72 bp) was performed on the NextSeq 550 (Illumina), using the v2.5 High Output Kit.
-
bioRxiv - Genomics 2023Quote: ... A genotyping of COVID-19 and healthy samples was performed using Infinium Asian Screening Array (Illumina) through collaboration with Japan COVID-19 Task Force (https://www.covid19-taskforce.jp/en/home/) ...
-
bioRxiv - Genetics 2023Quote: ... (2014)[32] used 825 samples and the gene expression data were generated from Illumina Human HT-12 V3 BeadChips ...
-
bioRxiv - Molecular Biology 2020Quote: ... Reads were confirmed to be post-quality control by Prinseq and mapped to the human donor sequence (hCoV-19/Germany/BavPat1/2020|EPI_ISL_406862|2020-01-28) using BWA (Illumina) and Pomoxis mini_align (Minion) ...
-
bioRxiv - Molecular Biology 2022Quote: ... Between 12-19 Libraries were pooled in equal amounts and sequenced on a HiSeq 2500 Sequencing System (Illumina).
-
bioRxiv - Genetics 2022Quote: ... sequence reads were mapped to the mouse reference genome GRCm38/mm10 (iGenomes, Illumina; chromosomes 1-19, X, Y, M) using the Rsubread v1.28.1 package in R v3.4.4 ...
-
bioRxiv - Evolutionary Biology 2019Quote: ... All 19 libraries were prepared at the facility using the Illumina stranded Truseq RNA kit (Illumina RS-122-2001) and all sequencing was performed on Illumina 150 paired-end Hiseq4000 ...
-
bioRxiv - Neuroscience 2022Quote: ... Using cutadapt v1.18101, the number of reads (minimum, 32 million; maximum, 73 million) was trimmed by Illumina sequencing adaptor and of bases with reading quality lower than 20 ...
-
bioRxiv - Cancer Biology 2021Quote: ... Up to 32 libraries were pooled and sequenced to 450 million reads on an NextSeq sequencer (Illumina).
-
bioRxiv - Genetics 2020Quote: ... Libraries that passed quality checks were then subjected to deep sequencing (8-47 × genome coverage; 19 × mean coverage, 11 × median coverage) by HiSeq 2500 (Illumina) or NovaSeq 6000 platforms (Illumina).
-
bioRxiv - Microbiology 2019Quote: RNA sequencing libraries were prepared using a previously described protocol optimized and adapted for miniaturization and automation.19 Libraries were sequenced on a NovaSeq 6000 machine (Illumina) to generate 150 nucleotide (nt) ...
-
bioRxiv - Genomics 2021Quote: ... SARS-CoV-2 viral sequences were captured with a COVID-19 Capture Panel covering the entire genome (IDT) and the products were sequenced on the NextSeq 550 (Illumina). The analysis pipeline included BaseSpace ...
-
bioRxiv - Immunology 2023Quote: ... was performed at 19-36 million reads/sample in single-end mode with 75 nt read length on the NextSeq 500 platform (Illumina) with 1 High Output Kit v2.5 ...
-
bioRxiv - Molecular Biology 2021Quote: ... The resulting libraries (fragment size 200-350bp) were multiplexed (17, 17, and 19 libraries, respectively) and sequenced using the NextSeq 500 platform (Illumina, USA), generating approximately 520 million single- end reads of 75 nucleotides in length.
-
bioRxiv - Immunology 2024Quote: ... RNAseq data of 4 databases covering 66 healthy tissues (Uhlen: n=122 individuals, n=32 tissues65; GTEx: n=1,315 individuals, n=53 tissues66; Illumina body map ...
-
bioRxiv - Microbiology 2024Quote: ... Sequencing was performed for 32 total samples in MiSeq v2 250 bp paired-end format (Illumina, San Diego, CA).
-
bioRxiv - Genomics 2022Quote: ... QV statistics was calculated using the Merqury software [19] using HiFi data (for the new genome) and Illumina paired-end data (for the Illumina-based genome).
-
bioRxiv - Genomics 2021Quote: ... were downloaded from the Bovine Genome Variation Database (Chen et al., 2020(32)) while the SNPs of the BovineHD BeadChip (assembly: bosTau4) were obtained from Illumina’s site ...
-
bioRxiv - Neuroscience 2023Quote: ... and pooled up to 32 amplicons in equimolar concentrations before running with 75 bp paired-end reads on the MiSeq (Illumina).
-
bioRxiv - Genomics 2020Quote: ... and libraries were constructed by the Lexogen QuantSeq 3’ mRNA-Seq Library Kit FWD (Lexogen, Vienna, Austria).19 All RNA libraries were sequenced by the Illumina HiSeq4000 (Illumina, San Diego, CA). Raw sequencing data were aligned to the reference genome (GRCh37 ...
-
bioRxiv - Genomics 2019Quote: ... we used the miRNA quantifications from all brain libraries with all starting amounts using both batches (total of 99 libraries, 19 for the Clontech, NEXTflex, Deduped and Fivepercent methods and 10 for Illumina and 13 for NEB). We normalized the data using the DESeq2(40 ...
-
bioRxiv - Microbiology 2023Quote: ... DNA extracts were used for metagenomic library preparation as described previously (32) using Illumina Nextera DNA Library Preparation Kit (Illumina, San Diego, CA) and sequenced with 2×150 bp paired-end reads on a NovaSeq platform (Illumina).