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Citations for Illumina :
1 - 50 of 293 citations for Chromosome 10 Open Reading Frame 82 C10ORF82 Antibody since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genetics 2019Quote: ... 2) probes annotated to the X and Y chromosomes by Illumina, 3 ...
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bioRxiv - Molecular Biology 2020Quote: ... 82 and sequenced by a HiSeq4000 sequencer (Illumina).
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bioRxiv - Genetics 2019Quote: ... an open-source method that is being developed by Illumina, Inc ...
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bioRxiv - Cancer Biology 2024Quote: ... The chromosome copy number analysis was performed in GenomeStudio v.2.0 (Illumina) by using the cnvPartition v.3.2.1 plugin ...
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bioRxiv - Cancer Biology 2023Quote: ... Paired-end sequencing was performed for all libraries (read 1:28 bp, index read: 10 bp, read2: 82 bp) on a NovaSeq 6000 (Illumina) using NovaSeq SP Reagent Kits (100 cycles).
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bioRxiv - Evolutionary Biology 2024Quote: ... we fitted the coverage data along the chromosomes at two timepoints (first Illumina sequencing and second nanopore sequencing ...
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bioRxiv - Molecular Biology 2021Quote: ... Sequencing reading was performed with a NovaSeq 6000 system (Illumina). TM5(-Dox ...
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bioRxiv - Cancer Biology 2023Quote: ... 82 Samples were sequenced on a HiSeq2000 or NextSeq (Illumina). For analysis ...
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bioRxiv - Cancer Biology 2024Quote: ... We excluded probes targeting the sex chromosomes and those lacking a UCSC RefGene annotation (Illumina Human Methylation EPIC annotation 1.0 B5) ...
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bioRxiv - Immunology 2021Quote: ... and productive in-frame junction sequences were paired by Illumina read ID and compiled by CDR3 nucleotide and V(D)J gene identity ...
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bioRxiv - Microbiology 2019Quote: ... Resulting data were visualized along with the raw read data using IGV [82] and low abundance isoforms (supported by less than 500 junctional reads or 10 full-length reads from Illumina or nanopore data, respectively) removed prior to producing the final annotation.
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bioRxiv - Genomics 2021Quote: ... and (3) 134 Gb (~100× depth) chromosome conformation capture sequencing (Hi-C) data (sequenced by Illumina platform).
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bioRxiv - Genetics 2021Quote: ... the DNA sequencing reads (pre-mapped to the X chromosome by Illumina’s ISIS Analysis Software v.2.5.26.1352) were realigned to the GRCh38 X chromosome reference sequence using BWA-MEM in SpeedSeq v0.1.253 ...
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bioRxiv - Genomics 2022Quote: ... Chromosome-scale scaffolding was then performed by HiRise44 with Hi-C reads obtained from HiSeq 2500 (Illumina).
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bioRxiv - Cancer Biology 2022Quote: ... Prepared RNA libraries were sequenced by 79 + 79 paired-end reading using NextSeq550 (Illumina).
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bioRxiv - Genetics 2019Quote: ... Reading of the chips was performed on iScan+ scanners (Illumina®, San Diego, USA).Primary analysis of the genotyping results was done using the GenomeStudio software (Illumina® ...
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bioRxiv - Immunology 2022Quote: ... Sequencing was performed using 75-base single-end reading on a NextSeq instrument (Illumina).
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bioRxiv - Genetics 2022Quote: ... sequence reads were mapped to the mouse reference genome GRCm38/mm10 (iGenomes, Illumina; chromosomes 1-19, X, Y, M) using the Rsubread v1.28.1 package in R v3.4.4 ...
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bioRxiv - Genomics 2020Quote: Libraries for mini-chromosome sequencing were generated following the general guidelines of the Nextera Flex library preparation kit (Illumina). We modified the protocol as follows ...
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bioRxiv - Genetics 2021Quote: ... Loss of heterozygosity along the entire long arm of chromosome 15 in AS-UPD9 iPSCs was confirmed by Illumina CytoSNP-850K v1.2 array by the University of Connecticut Chromosome Core ...
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bioRxiv - Genomics 2020Quote: ... and open sea regions64) as indicated by the Illumina HumanMethylation450 v1.2 Manifest (Illumina Inc., San Diego, USA), and
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bioRxiv - Immunology 2022Quote: ... Samples were sequenced using 150 bp paired-end reading on a NovaSeq 6000 instrument (Illumina). RNA-sequencing datasets from P25 RPE obtained from C57BL/6 ...
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bioRxiv - Genomics 2021Quote: ... The consensus sequence was generated from whole-genome Illumina data of wheat Synthetic W7984 (SRP037990, Chapman et al., 2015) while the chromosome-specific units were reconstructed from Illumina reads for CS 1BS (ERX250504 ...
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bioRxiv - Genetics 2022Quote: Three genotyping platforms were used across the ADGC cohorts with sufficient Y chromosome probes to allow copy number determination (Illumina 610 ...
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bioRxiv - Immunology 2022Quote: ... Samples were sequenced using 150bp base pair paired-end reading on a NovaSeq 6000 instrument (Illumina). The raw reads were then subjected to trimming by btrim 10 to remove sequencing adaptors and low-quality regions ...
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bioRxiv - Genetics 2019Quote: ... We also updated the positions of 495 SNPs annotated as lying on the pseudo-autosomal part of the X chromosome (Chr=‘XY’ in the Illumina manifest) but with position = 0 ...
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bioRxiv - Evolutionary Biology 2023Quote: We sequenced the targeted Y-chromosome regions in 5,020 samples using the YHseqY3000 panel on the Illumina platform (Illumina, San Diego, CA, USA) and used the BWA v.0.7.13 (Li and Durbin 2009 ...
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bioRxiv - Microbiology 2022Quote: ... libraries were subjected to paired-end sequencing with a reading length of 150 bp using Illumina Novaseq 6000 (Illumina).
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bioRxiv - Cell Biology 2023Quote: ... The captured fragments were pair-end sequenced by 101 bp reading using NovaSeq 6000 with S4 flow cell (Illumina). Sequenced reads were aligned to reference human genome (GRCh37/hg19 ...
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bioRxiv - Plant Biology 2020Quote: ... The libraries thus obtained were characterized and quantified before sequencing using a single lane Hiseq4000 and 50 cycles PE reading (Illumina).
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bioRxiv - Immunology 2020Quote: ... RNA libraries were then prepared from two biological replicates per condition and samples were sequenced using 75 base pair single-end reading on HiSeq 2500 high-output instrument (Illumina). The raw reads were then subjected to trimming by Trim Galore (https://github.com/FelixKrueger/TrimGalore ...
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bioRxiv - Microbiology 2019Quote: ... FastANI was run on all pairwise comparisons of MAGs that were initially assessed using checkM (82 hybrid, 44 Illumina-only) (Jain et al. ...
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bioRxiv - Microbiology 2021Quote: ... The purified PCR products were then processed and sequenced using the NextSeq 75 – High Output (82 cycles in read 1, 8 cycles in index 1, and 8 cycles in index 2 SE reads) (Illumina). The sequencing data was analyzed using the Model-Based Analysis of Genome-wide CRISPR/Cas9 Knockout (MAGeCK ...
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bioRxiv - Microbiology 2020Quote: ... and 10% PhiX (Illumina) spike-in ...
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bioRxiv - Developmental Biology 2023Quote: ... P2 100 cycles (Read1-28; Read2-90; Index1-10; Index2-10) (Illumina, cat no. 20046811). Cell Ranger version 6 and version 7.1 (for batch 1 and batch 2 respectively ...
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bioRxiv - Molecular Biology 2021Quote: ... 10% PhiX Sequencing Control V3 (Illumina) was added to the pooled amplicon library prior to running the sample on a Miseq Sequencer System (Illumina ...
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bioRxiv - Cancer Biology 2023Quote: ... 10% PhiX Sequencing Control V3 (Illumina) was added to the pooled amplicon library prior to running the sample on an Miseq Sequencer System (Illumina ...
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bioRxiv - Genetics 2023Quote: ... 10% PhiX Sequencing Control V3 (Illumina) was added to the pooled amplicon library prior to running the sample on an Miseq Sequencer System (Illumina ...
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bioRxiv - Cancer Biology 2023Quote: ... 10% PhiX Sequencing Control V3 (Illumina) was added prior to running the sample on an Miseq Sequencer System (Illumina ...
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bioRxiv - Cancer Biology 2023Quote: ... adding 10% PhiX spike-in (Illumina).
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bioRxiv - Cancer Biology 2023Quote: ... and analyzed using iScan (10) (Illumina). Raw idat files were processed using GenomeStudio Version 2.0 (Illumina ...
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bioRxiv - Cell Biology 2022Quote: ... (Illumina HiSeq, single index, 10 samples/lane), and underwent RiboZero Gold purification ...
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bioRxiv - Cancer Biology 2024Quote: ... including a 10% PhiX spike-in (Illumina) and sequenced on a MiSeq (Illumina ...
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bioRxiv - Genomics 2020Quote: ... Next nuclei were pelleted and the transposition reaction was performed incubating the lysate for 30 min at 37 °C under agitation in the presence of Transposition mixture (Tris-HCl pH 7.6 10 mM, MgCl2 5 mM, dimethyl formamide 10%, Tn5 enzyme 100 nM – Illumina #20018704 ...
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bioRxiv - Evolutionary Biology 2021Quote: ... Libraries were diluted to 2 nM in 10 μL 10 mM Tris-HCl (pH 8.5) and sequenced on a HiSeq2500 (Illumina) using a v2 Rapid SR50 cartridge (Illumina ...
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bioRxiv - Molecular Biology 2022Quote: ... The chromatin was then tagmented by resuspending beads in 29 µl Tagmentation Buffer (10 mM Tris-HCl pH 8.0, 5 mM MgCl2, 10% dimethylformamide) and adding 1 µl of transposase (Illumina). Samples were incubated at 37 °C for 10 min and the reaction was terminated by adding 150 µl RIPA buffer ...
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bioRxiv - Systems Biology 2023Quote: ... then loaded at 0.75nM and sequenced paired-end (Rd1:28 Rd2:10 Rd3:10 Rd4:50) on a Novaseq 6000 (Illumina).
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bioRxiv - Genomics 2023Quote: ... We used 15 mins incubation on ice in the nuclei preparation step and the Tn5 reaction was performed in 50 μl of custom transposition buffer (10 mM Tris pH 8, 5 mM MgCl2 and 10% dimethylformamide) with 2.5 μl Tn5 transposase (Illumina, 20034197) at 37°C while mixing at 1000 rpm for 30 mins ...
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bioRxiv - Microbiology 2019Quote: ... mixed with 10% PhiX sequencing control (Illumina, inc), diluted to 4.0 pM ...
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bioRxiv - Genetics 2019Quote: ... 10% PhiX control library (Illumina v3 control library) was spiked in to facilitate sequencing by generating additional sequence diversity ...