Labshake search
Citations for Illumina :
1 - 50 of 55 citations for Adenovirus Type 11 Particles Wild type since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Microbiology 2021Quote: ... A draft wild type phi47 genome was assembled de novo from Illumina reads obtained from MiGS ...
-
bioRxiv - Developmental Biology 2023Quote: ... Libraries 1-3 (wild type) were sequenced on a NovaSeq 6000 (Illumina) and the mutant library was sequenced on a NextSeq 500 (Illumina) ...
-
bioRxiv - Microbiology 2021Quote: ... (Canada) (Sequencing type: Illumina NovaSeq 6000 S4 PE100 - 25M reads ...
-
bioRxiv - Molecular Biology 2022Quote: ... Illumina array type (Illumina Infinium MethylationEPIC or Methylation450K BeadChip) ...
-
bioRxiv - Neuroscience 2021Quote: All three mutants were outcrossed three to four times with a wild-type genetic background and sequenced by Illumina Hi-Seq 2500 (single-read ...
-
bioRxiv - Genetics 2019Quote: Libraries for three edited samples and three wild type controls were processed following TruSeq RNA library prep kit v2 protocol (Illumina). RNA-Seq reads were aligned to GRCh38 ...
-
bioRxiv - Plant Biology 2023Quote: ... together with a wild type (WT) plant were whole genome sequenced with an Illumina sequencer (Illumina Inc., San Diego, USA). One μg of DNA was used to prepare short insert (length 350 bp ...
-
bioRxiv - Molecular Biology 2021Quote: Libraries from human liver tissue and wild type FL83B cells were prepared with TruSeq Stranded Total RNA Library Prep Gold (Illumina, #20020599), single-read sequencing was performed using the NextSeq 500 (Illumina) ...
-
bioRxiv - Genomics 2020Quote: Three types of sequencing reads from Illumina, PacBio ...
-
IRF1 regulates self-renewal and stress-responsiveness to support hematopoietic stem cell maintenancebioRxiv - Cell Biology 2023Quote: ... Sequencing was performed using Nova Seq S4 (run type: PE100, type of library: NexteraXT, 25 million reads per sample; Illumina). Preprocessing and analysis were done using Galaxy Quality and adapter trimming of reads was performed using RNA Galaxy workbench 2.058 ...
-
bioRxiv - Plant Biology 2021Quote: ... biological replicates for each of eleven tissue types from Illumina mRNA-seq libraries were aligned independently using STAR v2.5.3a (Dobin et al. ...
-
bioRxiv - Developmental Biology 2023Quote: ... Both types of arrays were scanned on a NextSeq 550 system (Illumina). HMW genomic DNA was sequenced to ∼30x coverage on a NovaSeq 6000 (Illumina) ...
-
bioRxiv - Genomics 2020Quote: ... The first type consists of Labyrinthula transcripts generated in this study by sequencing (Illumina) and assembling the transcriptome (Haas et al ...
-
bioRxiv - Genetics 2022Quote: DMDSC genotyping was conducted for approximately 5,801 patients with type 2 diabetes by Illumina using the global screening arrays version (GSA v1.0) ...
-
Alzheimer’s patient brain myeloid cells exhibit enhanced aging and unique transcriptional activationbioRxiv - Neuroscience 2019Quote: ... The libraries were multiplexed within cell types and then sequenced on Illumina HiSeq2500 (Illumina) to generate 50M of single end 50bp reads.
-
bioRxiv - Genomics 2021Quote: ... HLA types were further confirmed with ImmunoArray-24 BeadChip v2.0 (Infinium) or HumanImmuno BeadChip v1.0 (Illumina) and HLA imputation [36] ...
-
bioRxiv - Genomics 2020Quote: ... Libraries for each sample type were prepared using the TruSeq Stranded Total RNA Library Prep Kit (Illumina), multiplexed and 75 bp paired-end sequenced over 4 lanes on an Illumina NextSeq 500 Sequencing System at the sequencing core facility at LANGEBIO ...
-
bioRxiv - Genomics 2019Quote: WGS libraries were prepared using optimized Illumina protocols depending on DNA type (Illumina, San Diego, California, United States). The Early Access FFPE-extracted gDNA Library preparation kit (Illumina ...
-
bioRxiv - Cell Biology 2019Quote: ... For all cell types libraries were prepared using a TruSeq Stranded Total RNA Kit with Ribo-Zero Gold (Illumina) using 200ng of RNA ...
-
bioRxiv - Genomics 2022Quote: Combined with four types of libraries constructed: (1) the short-read sequencing library with 350-bp insertions from Illumina HiSeq X Ten instrument platforms ...
-
bioRxiv - Developmental Biology 2020Quote: Pearson correlations were calculated among all genes across a catalog of 38 tissues/cell types derived from all three germ layers (16 Illumina BodyMap 2.0 tissues ...
-
bioRxiv - Immunology 2021Quote: ... Sequencing libraries were constructed using TruSeq stranded mRNA method and sequenced using run type PE100 on an Illumina NovaSeq6000 sequencer (Illumina). RNA quality assessment and RNA-seq were conducted at the IGM Genomics Center ...
-
bioRxiv - Cancer Biology 2022Quote: ... equal amount of RNA from each sample or cell types were used to generate the library using the TruSeq RNA Sample Prep Kit v.2 (Illumina). Paired-end sequencing was performed using TruSeq 3000 4000 SBS Kit v.3 (Illumina ...
-
bioRxiv - Cancer Biology 2022Quote: All 450K array methylation level files were downloaded (Data Type: “Methylation beta value”, Platform: “Illumina Human Methylation 450”; n = 507). The average CpG methylation level over DMRs identified in this study and GENCODE transcript promoters was calculated in all TCGA LUAD and matched normal samples ...
-
bioRxiv - Genomics 2020Quote: ... Samples were prepared separately from each of the three biological replicates of each tissue type using the TruSeqTM RNA Sample Preparation Kits (v2) and sequenced using the Illumina HiSeq 2500 instrument (Illumina Inc., USA) at the Center for Genomic Research and Biocomputing ...
-
bioRxiv - Cancer Biology 2020Quote: ... MCF10A libraries from three biological replicates of each cell type were prepared using NEBNext® Ultra(tm) RNA Library Prep Kit (Illumina®) and sequenced on HiSeq X by Annoroad Gene Technology Ltd ...
-
bioRxiv - Neuroscience 2020Quote: ... 50bp RNA-seq of IP fractions and total homogenate from 5 replicates per cell type (20 samples total) was performed on a single lane of a HiSeq 3000 (Illumina, San Diego, California), yielding ∼350M reads ...
-
bioRxiv - Physiology 2023Quote: ... All libraries within a tissue type were pooled to equimolar amounts and sequenced on two lanes of an Illumina NovaSeq (Illumina, San Diego, CA) machine to obtain 150 bp paired-end reads.
-
bioRxiv - Cancer Biology 2019Quote: ... we obtained 11 DNA methylation datasets (Illumina 450k platform) from Gene Expression Omnibus (GEO ...
-
bioRxiv - Cancer Biology 2022Quote: ... for 11 cycles and sequenced on a NextSeq 500 (Illumina). All samples were processed at the Center for Epigenetics Research (CER ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... (2016) sequenced mouse whole genomes to 11-26x coverage (Illumina HiSeq 2000) from natural populations of house mouse (Mus musculus) ...
-
bioRxiv - Genetics 2021Quote: ... http://www.ebi.ac.uk/ena/) under accession number (PRJEB9450).These 29 wild-caught mice were sequenced by Illumina Hiseq 2000 at the Max Planck institute (Harr et al. ...
-
bioRxiv - Plant Biology 2019Quote: ... 8-11 kb size were made following the standard Illumina protocols (Illumina, San Diego, CA) and sequenced with HiSeq4000 platform (Illumina ...
-
bioRxiv - Microbiology 2023Quote: The USEARCH pipeline (v.11) [44] was used to process the data obtained from Illumina sequencing ...
-
bioRxiv - Genomics 2019Quote: ... DNA fragments were subjected to 11 cycles of PCR amplification with Nextera dual index primers (Illumina) and the NEBNext High Fidelity 2X PCR Master Mix (New England Biolabs ...
-
bioRxiv - Genetics 2023Quote: ... 10/11-plex pre- pooled target capture was performed and sequenced in 43 lanes by Illumina HiSeq 2000 ...
-
bioRxiv - Evolutionary Biology 2021Quote: ... and 2017 (n = 11) were prepared into two Illumina TruSeq LT libraries (Illumina, Inc. San Diego, CA), and sequenced on two Illumina NextSeq500 runs.
-
bioRxiv - Genomics 2021Quote: ... 11 kb and 13 kb) were prepared following Nextera protocol (Nextera Mate Pair sample preparation kit, Illumina). Each library was sequenced using 100 base-length read chemistry on a paired-end flow cell on the Illumina HiSeq2000 (Illumina ...
-
bioRxiv - Microbiology 2019Quote: ... MS-103-2003) at a concentration of 15 nM with addition 25% Phix Control v3 (Illumina, FC-11-2003). The Mi-Seq separates all sequencing data by sample during post-run processing using recognised barcoded indices to generate FASTAQ files ...
-
bioRxiv - Molecular Biology 2019Quote: ... MS-103-2003) at a concentration of 15 nM with addition 25% Phix Control v3 (Illumina, FC-11-2003). The MiSeq separated all sequences by sample during post-run processing by recognised indices and to generate FASTQ files.
-
bioRxiv - Evolutionary Biology 2019Quote: ... MS-103-2003) at a concentration of 15 nM with addition 25% Phix Control v3 (Illumina, FC-11-2003).
-
bioRxiv - Genetics 2020Quote: ... MS-103-2003) at a concentration of 15 nM with addition of 15% Phix control v3 (Illumina, FC-11-2003). The Illumina Mi-Seq post-run processing uses the barcoded indices to split all sequences by sample and generate FASTQ files ...
-
bioRxiv - Genetics 2021Quote: ... 3) SpliceAI (SAI)11 scores were retrieved using a script adapted from the SAI github repository (https://github.com/Illumina/SpliceAI) which allows spliceAI to score custom sequences ...
-
bioRxiv - Genetics 2020Quote: ... Libraries that passed quality checks were then subjected to deep sequencing (8-47 × genome coverage; 19 × mean coverage, 11 × median coverage) by HiSeq 2500 (Illumina) or NovaSeq 6000 platforms (Illumina).
-
bioRxiv - Genetics 2020Quote: ... MS-103-2003) at a concentration of 15nM with the addition of 15% Phix Control v3 (Illumina, FC-11-2003) previously described by Shaukat et al ...
-
bioRxiv - Evolutionary Biology 2021Quote: ... a panel of 13 SNPs located in the MHC class IIa region haplotypes including 11 SNPs from the Ovine Infinium high density SNP array (Illumina) and two other SNPs located within DQA1 gene were selected to impute eight haplotypes using Kompetitive Allele-specific PCR (KASP ...
-
bioRxiv - Microbiology 2022Quote: ... MS-103-2003) at a concentration of 15nM with the addition of 15% Phix Control v3 (Illumina, FC-11-2003) described by Chaudhry et al ...
-
bioRxiv - Bioengineering 2019Quote: ... cDNA was amplified by 15 PCR cycles and 10-11 samples were pooled before sequencing for 100 base pair single-end reads on a HiSeq 4000 instrument (Illumina).
-
bioRxiv - Genomics 2021Quote: ... DNA was PCR amplified for a total of 11-13 cycles using barcoded primers (Illumina Nextera XT Index Kit v2) and purified using Ampure beads (1.4:1 beads:sample ratio) ...
-
bioRxiv - Genetics 2019Quote: ... MS-103-2003) at a concentration of 15 nM with an addition of 25% Phix Control v3 (Illumina, FC-11-2003).