Labshake search
Citations for Illumina :
3551 - 3600 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2024Quote: ... and TruSeq adapters and barcoded primers (Illumina), following the manufacturer’s protocols ...
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HAdV-5 infection dysregulates cysteine, purine, and unsaturated fatty acid metabolism in fibroblastsbioRxiv - Microbiology 2024Quote: ... qPCR reactions to confirm viral infection were performed using an Eco Real-Time PCR System (Illumina). Viral titer was achieved by using a modified SYBR-based dye assay protocol featuring the HuAdV5-PanE1A primer set (26).
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bioRxiv - Molecular Biology 2024Quote: ... 800 ng of RNA was used as input for library preparation using the TruSeq Stranded Total RNA Library Prep Gold kit (Illumina, San Diego, CA, USA) with rRNA Removal Mix ...
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bioRxiv - Neuroscience 2024Quote: ... Demultiplexed FASTQ files were generated with bcl2fastq2 v2.20.0.422 (Illumina).
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bioRxiv - Genetics 2024Quote: ... The DNA library was then hybridized to an exome capture library (Nextera, Illumina Inc.) and precipitated using streptavidin-coated magnetic beads (Nextera ...
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bioRxiv - Developmental Biology 2024Quote: ... Cells were submitted for 10x library preparation with v3.0 chemistry for 3’ single-cell sequencing on a NovaSeq 6000 (Illumina) at the Cancer Research UK Cambridge Institute.
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bioRxiv - Genetics 2024Quote: ... and sequenced on a NovaSeq 6000 sequencing platform (Illumina, California, San Diego, USA) as 75 bp single-end reads ...
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bioRxiv - Genetics 2024Quote: ... cDNA libraries were constructed using the QuantSeq 3′ mRNA-Seq Library Prep Kit FWD (Illumina, Lexogen GmbH, Vienna, Austria) following manufacturer’s instructions ...
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bioRxiv - Evolutionary Biology 2024Quote: ... resuspended in 25 μL of 2x TD buffer and 2.5 μl of Tn5 transposase from the Nextera DNA Library Prep kit (Illumina, San Diego, CA), and incubated at 37°C for 30 minutes ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Genomic DNA was first fragmented with Nextera reagent (Illumina, Inc.), which also ligates short adapter sequences to the ends of the fragments ...
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bioRxiv - Genomics 2024Quote: ... Basecalling and demultiplexing were performed with bcl2fastq (v2.20, Illumina Inc.).
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bioRxiv - Plant Biology 2024Quote: ... The Illumina TruSeq Stranded mRNA Sample Preparation Kit (Illumina Inc.) was used according to the manufacturer’s protocol ...
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bioRxiv - Plant Biology 2024Quote: ... Libraries were sequenced in a MiSeq (Illumina) platform using 250 bp paired-end reads ...
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bioRxiv - Plant Biology 2024Quote: ... produced by Illumina NovaSeq 6,000 ...
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bioRxiv - Microbiology 2024Quote: ... CA on the NovaSeq 6000® (Illumina, San Diego, CA) platform.
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bioRxiv - Microbiology 2024Quote: ... Sequencing libraries were prepared with the Illumina DNA Library Prep Kit (Illumina, San Diego, CA) with up to 500 ng DNA input following the manufacturer’s protocol using unique dual-index 10 bp barcodes with Nextera® adapters (Illumina ...
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bioRxiv - Microbiology 2024Quote: ... with up to 500 ng DNA input following the manufacturer’s protocol using unique dual-index 10 bp barcodes with Nextera® adapters (Illumina, San Diego, CA). All libraries were pooled in equal abundance ...
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bioRxiv - Microbiology 2024Quote: ... RiboZero: rRNA was removed from 10 ng of total RNA using Ribo-Zero(TM) rRNA Removal Kit (Illumina, San Diego, CA, USA). Stranded cDNA libraries were generated using the Illumina Truseq Stranded mRNA Library Prep kit ...
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bioRxiv - Immunology 2024Quote: ... Sequencing was performed using NovaSeq 6000 sequencer (Illumina, San Diego, CA). Gene ontology (GO ...
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bioRxiv - Immunology 2024Quote: ... The libraries were sequenced by Illumina NovaSeq 6000.
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bioRxiv - Genomics 2024Quote: ... followed by Illumina PE150 sequencing at a depth of 23 Gb raw data per sample for in planta samples and 9 Gb per sample for in vitro mycelial RNA samples.
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bioRxiv - Genomics 2024Quote: ... using parental k-mer databases created from Illumina reads with meryl v1.3 ...
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bioRxiv - Genomics 2024Quote: ... Libraries were prepared with Nextera DNA Flex (Illumina) and sequenced with Illumina Hiseq 4000 at the Lausanne Genomic Technologies Facility (GTF ...
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bioRxiv - Genomics 2024Quote: ... we performed short Variant Calling and structural variant calling using two distinct pipelines: a short read (Illumina) based small variant calling workflow ...
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bioRxiv - Genomics 2024Quote: ... RPF library sequencing Fastq files (de-barcoded at the NHLBI core facility according to their 6-nt Illumina barcodes) were trimmed of their linkers and separated according to their 5-nt internal sample barcode using CUTADAPT ...
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bioRxiv - Genomics 2024Quote: ... Sequencing was performed with a NextSeq500 sequencer (Illumina) using a 75-nt single-end protocol ...
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bioRxiv - Molecular Biology 2024Quote: ... Library was prepared with a KAPA HyperPlus Kit (KAPA, USA) and sequenced on an Illumina NovaSeq 6000 platform (Illumina, USA) with a NovaSeq 6000 S2 Reagent Kit (200 cycles).
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bioRxiv - Microbiology 2024Quote: ... genomic DNA libraries were prepared using the Nextera XT Library Prep Kit (Illumina, USA) and sequenced on either the Illumina MiSeq or NextSeq (Illumina ...
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bioRxiv - Microbiology 2024Quote: Extracted RNA was used for library preparation using the stranded mRNA preparation kit (Illumina), skipping mRNA enrichment steps ...
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bioRxiv - Immunology 2024Quote: Samples were prepared TruSeq unstranded mRNA library (Illumina, San Diego, USA) and paired sequencing was performed using the Illumina NovaSeq 6000 system by Edinburgh Genomics (Edinburgh ...
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bioRxiv - Immunology 2024Quote: ... and ligated to sequencing adaptors using the TruSeq stranded mRNA sample preparation kit (RS-122-2101, Illumina). The molar concentrations of the indexed libraries were measured using the 2100 Bioanalyzer (Agilent ...
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bioRxiv - Microbiology 2024Quote: ... Amplicon libraries were sequenced by 2 × 250 bp paired-end sequencing on a MiSeq platform (Illumina, San Diego, CA, USA) using MiSeq v2 Reagent NANO Kit ...
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bioRxiv - Microbiology 2024Quote: BCL2FASTQ version 1.8.4 (Illumina) was used to convert the base calls into forward ...
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bioRxiv - Microbiology 2024Quote: ... Final libraries were sequenced on the NovaSeq 6000 platform (Illumina).
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bioRxiv - Microbiology 2024Quote: ... and library preparation with the TruSeq Stranded Total RNA LT Kit (Illumina catalog # RS-122-1202) according to instructions provided by the manufacturer with 8 cycles of PCR ...
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bioRxiv - Cancer Biology 2024Quote: ... NextSeq 500 sequencer from Illumina was utilized to sequence samples using single-end 75bp reads.
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bioRxiv - Cell Biology 2024Quote: ... Libraries were sequenced to a median depth of 35-40 million 100-bp single-end reads on a HiSeq sequencer (Illumina). The FASTQ files underwent quality control metrics (trimming) ...
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bioRxiv - Cell Biology 2024Quote: ... The RNA-Seq Differential Expression v1.0.1 workflow (Illumina BaseSpace) was used with default parameters to extract gene counts and to obtain differentially expressed genes (DEG)s with an adjusted p value (FDR ...
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bioRxiv - Cell Biology 2024Quote: ... Paired-end RNA sequencing was performed on the Illumina NextSeq500 sequencer (Illumina). For the second batch of samples ...
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bioRxiv - Cell Biology 2024Quote: ... Final libraries were sequenced on NovaSeq (Illumina, software v1.5) to a mean read depth of at least 50,000 total aligned reads per nuclei.
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bioRxiv - Evolutionary Biology 2024Quote: ... Genome library preparations took place at the Broad Institute using a Nextera XT Library Preparation Kit (Illumina). Libraries were sequenced on an Illumina HiSeq X instrument using a 300 cycle run format (150bp paired end reads).
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bioRxiv - Genomics 2024Quote: ... 2.5 µL Nextera Tn5 transposase (Illumina # FC-121-1030), and 22.5 µL of nuclease free water ...
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bioRxiv - Genomics 2024Quote: ... and prepared for sequencing as previously described using the Illumina Nextera XT library preparation kit (Illumina #FC-131-1096) or an in-house library preparation protocol10 ...
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bioRxiv - Microbiology 2024Quote: ... Sequencing on the Illumina platform was performed at the DNA Facility at Iowa State University using one Next-Tera XT 96-multiplexed library kit (Illumina) and a single Illumina HiSeq 3000 lane ...
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bioRxiv - Microbiology 2024Quote: NGS data from Illumina was also processed for the detection of vertebrate-infecting viruses [67] ...
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Component specific responses of the microbiomes to common chemical stressors in the human food chainbioRxiv - Microbiology 2024Quote: ... We barcoded the amplicons with the Access Array barcode system from Fluidigm in a two-step approach adapted from Illumina’s standard 16S profiling protocol ...
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bioRxiv - Microbiology 2024Quote: ... Sequencing was carried out by Novogene Co (https://www.novogene.com/us-en/) on a NovaSeq platform (Illumina, San Diego, CA) with a 2 x 150 bp configuration ...
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bioRxiv - Plant Biology 2024Quote: ... Libraries were sequenced using next-generation high-throughput sequencing (Illumina PE150). The raw data were filtered using trimmomatic software71 ...
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bioRxiv - Neuroscience 2024Quote: ... Unique dual 8 bp adapters (1.5 μM) (IDT for Illumina) were used for indexing ...
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bioRxiv - Systems Biology 2024Quote: Each library was sequenced using a NovaSeq 6000 platform (Illumina) by Novogene (China ...