Labshake search
Citations for Illumina :
3451 - 3500 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Immunology 2024Quote: ... Libraries were pooled and sequenced (paired-end 2*75bp) on a NextSeq500 using the NextSeq 500/550 High Output Kit v2 according to the manufacturer’s instructions (Illumina). For analysis ...
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bioRxiv - Genomics 2024Quote: ... and methylation levels of over 850,000 sites were assayed with the Infinium MethylationEPIC BeadChip (Illumina, San Diego, CA).
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bioRxiv - Genomics 2024Quote: ... were dual-indexed using differing barcode indexes both for the forward (5’ P5 Illumina adapter) and reverse oligos (3’ P7 Illumina adapter) ...
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bioRxiv - Immunology 2024Quote: ... they were sequenced on a NextSeq 500 instrument (Illumina) with a final loading concentration of 1.4 pM.
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bioRxiv - Microbiology 2024Quote: ... We extracted gDNA with the Beckman-Coulter gDNA extraction kit as above using the Nextera Flex Library Preparation Kit (Illumina). We quantitated libraries with a Qubit fluorometer (Life Technologies Corporation ...
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bioRxiv - Genomics 2024Quote: ... and reverse oligos (3’ P7 Illumina adapter). The GRB2-SH3 bPCA library was single-indexed using a constant forward oligo (3’ P7 Illumina adapter ...
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bioRxiv - Genomics 2024Quote: ... The GRB2-SH3 bPCA library was single-indexed using a constant forward oligo (3’ P7 Illumina adapter) and alternating reverse oligos (3’ P7 Illumina adapter) ...
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bioRxiv - Genomics 2024Quote: ... An assembly was first performed using Trinity RNA-seq[21] (Illumina using the Nanopore for scaffolding) and then by using Falcon (Nanopore only) ...
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bioRxiv - Microbiology 2024Quote: ... The adjusted DNA was purified and then sequenced using a next-generation sequencer (MiSeq, Illumina Inc.) to produce the library ...
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bioRxiv - Cell Biology 2024Quote: ... The amplified DNA was then pooled to a 10 nM final concentration followed by a 5% PhiX (Illumina) spike and sequenced in a PE100 run on a HiSeq 4000 sequencer (Illumina ...
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bioRxiv - Cancer Biology 2024Quote: ... FASTQ files were generated from Illumina’s binary base call raw output with Cell Ranger’s (v2.1.0 ...
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bioRxiv - Cell Biology 2024Quote: ... The library was sequenced on HiSeq systems (Illumina) using 150 nucleotides (nts ...
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bioRxiv - Genomics 2024Quote: ... Sequencing was performed on the NextSeq500 and NovaSeq6000 Sequencing Systems (Illumina).
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bioRxiv - Genomics 2024Quote: ... using NextSeq 500/550 High Output Kit v2.5 (150 Cycles) (Illumina, 20024907) at 200M reads per sample.
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bioRxiv - Neuroscience 2024Quote: ... Base call files for each sample from Illumina were demultiplexed into FASTQ reads ...
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bioRxiv - Immunology 2024Quote: ... and 150 bp paired-end reads of the library were generated using the Illumina Hiseq X Ten platform (Illumina, USA). Quality and adapter trimming of raw reads were performed using TrimGalore (Babraham Bioinformatics ...
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bioRxiv - Genomics 2024Quote: ... NGS libraries were produced using the Illumina DNA Prep Kit (Illumina, San Diego, CA) and amplified using ISOSDB412 IS-Seq Step1 and p7 primers for 13 cycles using Q5 Master Mix (New England Biolabs ...
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bioRxiv - Genomics 2024Quote: ... and alternating reverse oligos (3’ P7 Illumina adapter). The demulitplexing primers used for PCR2 are listed in Extended Data Table 4 ...
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bioRxiv - Genomics 2024Quote: ... BCL files were converted to FastQ files using bcl2fastq (v.2.19) from Illumina. Read 1 and Read 2 FastQ files were processed using a Snakemake pipeline (20) ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Genome library preparations took place at the Broad Institute using a Nextera XT Library Preparation Kit (Illumina). Libraries were sequenced on an Illumina HiSeq X instrument using a 300 cycle run format (150bp paired end reads).
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bioRxiv - Genomics 2024Quote: ... 2.5 µL Nextera Tn5 transposase (Illumina # FC-121-1030), and 22.5 µL of nuclease free water ...
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bioRxiv - Genomics 2024Quote: ... and prepared for sequencing as previously described using the Illumina Nextera XT library preparation kit (Illumina #FC-131-1096) or an in-house library preparation protocol10 ...
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bioRxiv - Microbiology 2024Quote: ... and analysed on a NextSeq sequencer (Illumina, Cambridge, UK) with 2 × 150 base paired-end reads ...
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bioRxiv - Microbiology 2024Quote: ... Sequencing libraries were generated in 384-well format using a custom low-volume protocol based on the Nextera XT process (Illumina). The concentration of DNA from each sample was normalized to 0.18 ng/µL using a Mantis liquid handler (Formulatrix) ...
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bioRxiv - Genomics 2024Quote: ... Basecalling and demultiplexing were performed with bcl2fastq (v2.20, Illumina Inc.).
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bioRxiv - Plant Biology 2024Quote: ... The Illumina TruSeq Stranded mRNA Sample Preparation Kit (Illumina Inc.) was used according to the manufacturer’s protocol ...
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bioRxiv - Plant Biology 2024Quote: ... Libraries were sequenced using next-generation high-throughput sequencing (Illumina PE150). The raw data were filtered using trimmomatic software71 ...
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bioRxiv - Neuroscience 2024Quote: ... Unique dual 8 bp adapters (1.5 μM) (IDT for Illumina) were used for indexing ...
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bioRxiv - Systems Biology 2024Quote: Each library was sequenced using a NovaSeq 6000 platform (Illumina) by Novogene (China ...
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bioRxiv - Systems Biology 2024Quote: ... The Nextera XT DNA Library Preparation Kit (Illumina 15032354) was used to perform tagmentation of 1 ng of cDNA ...
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bioRxiv - Plant Biology 2024Quote: ... using an Eco Real-Time PCR system (Illumina). Analysis was performed using the ddCT method with the qRAT tool and limma statistical framework (Flatschacher ...
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bioRxiv - Synthetic Biology 2024Quote: ... and whole plasmid sequences were verified using either the Nextera XT DNA library prep kit (Illumina, Catalog #FC-131-1096) or whole plasmid sequencing services (Plasmidsaurus Inc. ...
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bioRxiv - Synthetic Biology 2024Quote: ... The whole plasmid sequences were verified using Nextera XT DNA library prep kit (Illumina, Catalog #FC-131-1096) or whole plasmid sequencing services provided by Plasmidsaurus Inc ...
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bioRxiv - Neuroscience 2024Quote: ... Demultiplexed FASTQ files were generated with bcl2fastq2 v2.20.0.422 (Illumina).
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bioRxiv - Genetics 2024Quote: ... The DNA library was then hybridized to an exome capture library (Nextera, Illumina Inc.) and precipitated using streptavidin-coated magnetic beads (Nextera ...
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bioRxiv - Developmental Biology 2024Quote: ... Cells were submitted for 10x library preparation with v3.0 chemistry for 3’ single-cell sequencing on a NovaSeq 6000 (Illumina) at the Cancer Research UK Cambridge Institute.
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bioRxiv - Genetics 2024Quote: ... and sequenced on a NovaSeq 6000 sequencing platform (Illumina, California, San Diego, USA) as 75 bp single-end reads ...
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bioRxiv - Genetics 2024Quote: ... cDNA libraries were constructed using the QuantSeq 3′ mRNA-Seq Library Prep Kit FWD (Illumina, Lexogen GmbH, Vienna, Austria) following manufacturer’s instructions ...
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bioRxiv - Evolutionary Biology 2024Quote: ... resuspended in 25 μL of 2x TD buffer and 2.5 μl of Tn5 transposase from the Nextera DNA Library Prep kit (Illumina, San Diego, CA), and incubated at 37°C for 30 minutes ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Genomic DNA was first fragmented with Nextera reagent (Illumina, Inc.), which also ligates short adapter sequences to the ends of the fragments ...
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bioRxiv - Cell Biology 2024Quote: ... Using a TruSEQ mRNA RNA-SEQ library protocol (Illumina provided), strand-specific RNA-SEQ libraries were prepared ...
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bioRxiv - Cancer Biology 2024Quote: ... NextSeq 500 sequencer from Illumina was utilized to sequence samples using single-end 75bp reads.
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bioRxiv - Cell Biology 2024Quote: ... Libraries were sequenced to a median depth of 35-40 million 100-bp single-end reads on a HiSeq sequencer (Illumina). The FASTQ files underwent quality control metrics (trimming) ...
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bioRxiv - Cell Biology 2024Quote: ... The RNA-Seq Differential Expression v1.0.1 workflow (Illumina BaseSpace) was used with default parameters to extract gene counts and to obtain differentially expressed genes (DEG)s with an adjusted p value (FDR ...
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bioRxiv - Cell Biology 2024Quote: ... Paired-end RNA sequencing was performed on the Illumina NextSeq500 sequencer (Illumina). For the second batch of samples ...
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bioRxiv - Cell Biology 2024Quote: ... Final libraries were sequenced on NovaSeq (Illumina, software v1.5) to a mean read depth of at least 50,000 total aligned reads per nuclei.
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bioRxiv - Neuroscience 2024Quote: ... and IDT adapters for Illumina TruSeq DNA UD Indexes (96 Indexes, 96 Samples) for total RNA or using the TruSeq Small RNA Library Prep (Illumina) for miRNAs ...
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bioRxiv - Neuroscience 2024Quote: The samples were sequenced with the NovaSeq 6000 system (Illumina) with a paired-end 2x100 cycle procedure ...
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bioRxiv - Neuroscience 2024Quote: ... and subsequent sequencing on an S1 lane using the NovaSeq 6000 (Illumina, San Diego, CA, USA).
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bioRxiv - Microbiology 2024Quote: ... (M) Tagmentation (Illumina, https://www.illumina.com) and the 300-cycle iSeq Reagent Kit v2 (Illumina ...