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Citations for Illumina :
601 - 650 of 1321 citations for Dengue Virus Serotype 2 DIII envelope protein since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Systems Biology 2023Quote: ... and sequenced on a HiSeq 4000 using a 2×150bp Paired End configuration (Illumina, La Jolla, CA), targeting 50 million paired-end reads per library ...
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bioRxiv - Immunology 2023Quote: ... for 2 × 250 cycles using MiSeq PE cluster generation kits and MiSeq SBS Kit sequencing reagents (Illumina).
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bioRxiv - Genomics 2023Quote: ... Three runs of paired-end (2 x 150 bp) sequencing were performed on an Illumina MiSeq (Illumina) to generate 25 Gbp of raw data ...
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bioRxiv - Microbiology 2023Quote: ... Libraries were then sequenced for 2 x 150 paired-end reads on either a NovaSeq 6000 (Illumina) with the WUSTL Genome Technology Access Center or Nextseq 550 (Illumina ...
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bioRxiv - Plant Biology 2024Quote: ... Paired end sequencing (2 x 150 bp) was conducted using the NovaSeq6000 platform (Illumina, San Diego, USA). All samples produced between 32.5 and 36.6 million reads ...
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bioRxiv - Microbiology 2024Quote: ... The libraries were clustered and sequenced (2 x 150 bp) on a NextSeq 550 Sequencing System (Illumina) using a NextSeq 500/550 Mid Output v2.5 kit (300 cycles ...
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bioRxiv - Cell Biology 2024Quote: ... Paired-end (2 × 36 bases) sequencing was performed using a NextSeq500 platform (Illumina, San Diego, CA, USA). The FASTQ files were imported into the CLC Genomics Workbench (version 10.1.1 ...
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bioRxiv - Cancer Biology 2022Quote: ... ScRNA-seq libraries were prepared using the Next GEM Chromium single cell 3′ reagent kits V3.1 with feature barcode technology for cell surface protein (10x genomics) and sequenced using NextSeq 500 high output kits and Novaseq S4 PE100 kits (Illumina). scRNA-Seq data after standard quality control was aligned to the reference genome (mm10 ...
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bioRxiv - Immunology 2021Quote: ... Libraries were diluted to 2 nM and paired-end sequencing was performed on a HiSeq 2500 sequencer (Illumina). Stimulation libraries were diluted to 3nM and paired-end sequencing was performed on a NovaSeq 6000 (Illumina).
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bioRxiv - Developmental Biology 2021Quote: ... to determine library size and quantification before paired-end (2 × 41 bp) sequencing on a NextSeq 500 (Illumina) platform ...
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bioRxiv - Developmental Biology 2021Quote: ... Adapters were trimmed and low quality sequences removed using trimmomatic and the requisite Illumina adapter sequences (trimmomatic v0.38; PE -threads 2 ILLUMINACLIP:Illumina_TrueSeq_Adapters_PE.fa:2:30:10 HEADCROP:1 MINLEN:31) ...
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bioRxiv - Genomics 2022Quote: Paired-end DNA sequencing (2×151 bp) of the libraries was performed on the NovaSeq 6000 sequencer (Illumina) using the NovaSeq S4 Reagent Kit ...
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bioRxiv - Genomics 2020Quote: ... on Illumina’s official website (ftp://webdata2:[email protected]/downloads/productfiles/humanomniexpress-24/v1-2/infinium-ommexpress-24-v1-2-mamfest-file-csv.zip) and converted it to a VCF format using Illumina’s GTCtoVCF tool (github.com/Illumina/GTCtoVCF).
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bioRxiv - Genomics 2020Quote: ... Paired-end 2×100 bp RNA-sequencing (Illumina TruSeq RNA Library Prep Kit, Illumina HiSeq2000 and Illumina HiSeq4000) was performed ...
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bioRxiv - Immunology 2019Quote: ... in High Output mode (paired-end asymmetric 100bp for read) or a HiSeq4000 (Illumina; paired-end 2×75bp).
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bioRxiv - Developmental Biology 2019Quote: ... in paired-end mode with a read length of 2 × 100 bp using TruSeq SBS Kit v4 (Illumina). Each sample was sequenced in a fraction of a sequencing v4 flow cell lane ...
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bioRxiv - Genomics 2020Quote: ... The library preparation and strand-specific paired-end sequencing (2 × 150 bp) on a HiSeq 4000 platform (Illumina) was performed by Novogene Co. ...
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bioRxiv - Genomics 2021Quote: ... according to manufacturer”s instructions and sequenced using a 2 × 250-cycle MiSeq Reagent kit v3.0 (Illumina, CA).
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bioRxiv - Microbiology 2021Quote: ... Libraries were then multiplexed and submitted to the sequencing platform (Illumina MiSeq, pair end 2 x 250 bp). Reads with less than 36 bp were discarded and adaptor sequences were removed by Macrogen Inc.
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bioRxiv - Cancer Biology 2020Quote: ... the library was performed pair-end 2×100bp high-throughput sequencing using HiSeq 2500 and Nova-seq (Illumina).
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bioRxiv - Microbiology 2020Quote: ... lLibraries were diluted to 2 nM in 10 mM of TE and samples were sequenced with MiSeq (Illumina) using a paired-end approach ...
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bioRxiv - Plant Biology 2020Quote: ... An initial sequencing run took place on a MiSeq 2 × 300bp run (v3) (Illumina, San Diego, California, USA) at the Field Museum of Natural History ...
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bioRxiv - Microbiology 2020Quote: ... to a final concentration of 2 nM containing 15% PhiX V3 library control (Illumina, San Diego, CA, USA), the library pools were denatured for 5 min in an equal volume of 0.2M NaOH ...
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bioRxiv - Microbiology 2021Quote: Raw data from the Illumina MiSeq was first converted into FASTQ format 2 × 312 paired-end sequence files using the bcl2fastq program (v1.8.4) provided by Illumina. Format conversion was performed without de-multiplexing ...
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bioRxiv - Microbiology 2020Quote: ... Isolated RNA was heat fragmented and libraries were prepared for 2 × 250 nucleotide paired-end sequencing performed (Illumina). Genewiz performed basecalling and read demultiplexing.
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bioRxiv - Microbiology 2020Quote: ... Paired-end sequences of 2 x 150 bp were generated for all libraries on the NovaSeq platform (Illumina). Metagenomic sequence reads are publicly available on the JGI IMG portal.
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bioRxiv - Microbiology 2022Quote: Genomic DNA extraction and the sequencing library preparation for short-read 2×250 bp paired-end MiSeq (Illumina) sequencing was performed as described before (Valcek et al. ...
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bioRxiv - Immunology 2022Quote: ... Equimolar amounts of each library were paired-end sequenced (2 × 38 bp) on a NextSeq 550 instrument (Illumina).
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bioRxiv - Cell Biology 2022Quote: ... Paired-end 2×100 bp RNA-sequencing (Illumina TruSeq RNA Library Prep Kit, Illumina HiSeq2000 and Illumina HiSeq4000) was performed ...
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bioRxiv - Cell Biology 2022Quote: ... Paired-end 2×100 bp RNA-sequencing (Illumina TruSeq RNA Library Prep Kit, Illumina HiSeq2000 and Illumina HiSeq4000) was performed ...
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bioRxiv - Genomics 2020Quote: ... Libraries were sequenced using the NovaSeq SP Reagent kit (2 × 150 cycles) from Illumina (San Diego, CA, USA). Sample L5630 underwent a target enrichment approach where double stranded DNA (synthesized using the QuantiTect Reverse Transcription Kit from Qiagen ...
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bioRxiv - Genomics 2020Quote: ... Finaly libraries were then pooled and diluted to 2 nM and subsequently sequenced using Illumina HiSeq 2500 (Illumina).
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bioRxiv - Microbiology 2021Quote: ... Transposon mutagenesis was performed with the EZ-Tn5
2>Tnp Transposome kit (Epicentre, Illumina, CA, USA) and the insertion site of all mutants was determined via arbitrary PCR (Segev et al ... -
bioRxiv - Cancer Biology 2020Quote: All statistical analyses were performed in R versions 3.5.2 or 3.5.3(23) except p-values for gene ontology and pathway enrichments which were calculated by Illumina’s BaseSpace Correlation Engine and p-values for motif enrichments which were calculated by MEME suite(24) ...
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bioRxiv - Neuroscience 2021Quote: ... and high-throughput sequencing was carried out using a HiSeq4,000 (2×75-base-pair paired-end configuration; Illumina). Bioinformatics analyses were performed as described (52)
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bioRxiv - Neuroscience 2021Quote: ... 2 μg of total RNA were treated with the Ribo-Zero rRNA Removal Kit (Human/Mouse/Rat; Illumina). Depleted RNA was precipitated 1h at −80°C in three volumes of ethanol plus 1 μg of glycogen ...
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bioRxiv - Microbiology 2021Quote: ... The sequencing library was prepared using the Nextera XT V.2 Index Kit (Sets A and D, Illumina) according to the Illumina 16S MiSeq Sequencing Library protocol ...
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bioRxiv - Microbiology 2022Quote: ... The tiled amplicons were then sequenced with 2×150 bp on a MiSeq instrument (Illumina, San Diego, USA). Reads were analyzed with GENCOV https://github.com/metagenlab/GENCOV) ...
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bioRxiv - Cancer Biology 2019Quote: ... Multiplexed libraries (12 samples per pool) were sequenced across 2 lanes of the HiSeq 2500 DNA Analyzer (Illumina) to generate a total of approximately 20 million 75 bp single reads for each sample ...
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bioRxiv - Genomics 2019Quote: Structural variants were called from Illumina HiSeq 300x 2×150bp data (previously aligned to hs37d5) using Manta (version 1.2.2, code at https://github.com/Illumina/manta) with default options and Delly (version 0.7.8 ...
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bioRxiv - Immunology 2019Quote: ... The pellet was resuspended in the transposase reaction mix (25 μl 2× TD buffer, 2.5 μl transposase (Illumina) and 22.5 μl nuclease-free water ...
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bioRxiv - Physiology 2020Quote: ... Bisulfite-treated libraries were sequenced in paired-end mode (2 × 75 bp) on a HiSeq 4000 system (Illumina). The sequencing reads were trimmed to remove adapter sequences and low-quality bases (i.e. ...
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bioRxiv - Neuroscience 2021Quote: ... and high-throughput sequencing was carried out using a HiSeq4,000 (2×75-base-pair paired-end configuration; Illumina). Bioinformatics analyses were performed as described (47).
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bioRxiv - Microbiology 2019Quote: ... The qPCR efficiency of the assay was calculated (FIG 2) using the following formula: Efficiency = 10[-1/Slope] (http://efficiency.gene-quantification.info/) by Illumina Eco Real-Time PCR system software ...
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bioRxiv - Microbiology 2021Quote: ... Aliquots of RNA (0.5-2 μg) were used for creation of RNA sequencing libraries and sequenced by Illumina HiSeq4000 (paired end 150bp reads ...
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bioRxiv - Neuroscience 2021Quote: ... Genome-wide genotyping was performed using Global Screening Array 24 version 2 (Illumina, Inc., San Diego, CA, USA) at the Life & Brain facilities ...
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bioRxiv - Cancer Biology 2020Quote: ... in paired-end mode on Illumina (2×101 bp) using TrueSeq DNA exome kit (v.6) (Illumina Inc.). Paired-end reads were aligned to the human reference genome sequence GRCh38 using BWA–MEM (V0.715-r1140 ...
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bioRxiv - Microbiology 2021Quote: ... Barcodes were ligated and libraries were sequenced using MiSeq V3 (300bp x 2) chemistry (Illumina, San Diego, CA). Sequencing was performed at the Centre for the Analysis of Genome Evolution and Function (Toronto ...
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bioRxiv - Microbiology 2020Quote: ... Paired-end 2 × 250bp sequencing was performed on an Illumina MiSeq instrument (Illumina Inc., San Diego, CA, USA) at Mr DNA (Shallowater ...
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bioRxiv - Genomics 2020Quote: ... Paired-end 2×100 bp RNA-sequencing (Illumina TruSeq RNA Library Prep Kit, Illumina HiSeq2000 and Illumina HiSeq4000) was performed ...